Version 1.2
Database System
  • About the System
  • Search MLST Database
  • Search RFLP Database
  • Data Submission
  • Online Tools
    • Downloads
  • Allele Sequences
  • Allele Profiles
  • Concatenated Sequences
  • Reference Sequences
    • Publications
  • MLST Protocols
  • EcMLST
    • Batch Multiple Locus Sequence Query
    Query format
  • Input sequences should be trimmed allele sequences with defined lengths. Using untrimmed sequences, you can begin with BLAST search.
  • Sequence ambiguities are not allowed. Any digits will be ignored. Accepted input characters are a, t, g, c, A, T, G, C and -.
    		•
    Query interface
    Sequence format
         Example FASTA format     Example MEGA format
    Please enter the sequences in text boxes below allele names. If a sequence is not available, leave the assigned text area blank.
    arcA

    		 aroE
    aspC

    		 clpX
    cyaA

    		 dnaG
    fadD

    		 grpE
    icdA

    		 lysP
    mdh

    		 mtlD
    mutS

    		 rpoS
    uidA
        
    Home About the System MLST Database RFLP Database Submission Tools Downloads Publications News Contact Us
    Operated by the STEC Center at Michigan State University
    National Institutes of Health (NIH) National Institute of Allergy and Infectious Diseases (NIAID) Food and Waterborne Diseases Integrated Research Network (FWD IRN) Microbiology Research Unit (MRU) Reference Center to Facilitate the Study of Shiga Toxin-Producing Escherichia Coli